The Penetration Tester’s Toolkit | Nmap, Burp Suite and Beyond

June 30, 2025

Introduction

In a world increasingly dependent on digital systems, cyber attacks have grown in sophistication and frequency. From ransomware disrupting critical services to data breaches exposing millions of records, the digital battlefield is more active than ever. For cybersecurity professionals and IT teams, penetration testing has become an essential process for evaluating and strengthening defences.


This blog is for IT professionals, cybersecurity students, and business leaders who want to understand what tools penetration testers use to secure systems effectively. We will break down the essential tools, starting with the legendary Nmap and the multifaceted Burp Suite, and go beyond with modern resources that form a complete penetration testing toolkit.

Penetration Testing

Penetration testing, also known as ethical hacking, is the practice of simulating cyberattacks on systems, networks, or web applications to identify security weaknesses before malicious hackers do. It is like hiring a friendly burglar to find the gaps in your locks and alarms.


This process is not just technical; it is strategic. Penetration testing helps organisations meet compliance requirements, maintain trust with stakeholders, and continuously improve security posture. With cyber threats escalating, investing in a solid toolkit is no longer optional, it is a frontline necessity.

Common Threats or Challenges

Ignoring the need for penetration testing can lead to severe consequences. One major incident occurred in 2017 when the Equifax breach exposed the personal data of over 147 million people. The breach stemmed from a known vulnerability in Apache Struts, which was not patched. A basic scan could have flagged it.


Modern attackers use automated tools to scan the internet for weak points. Without proactive testing, even a small misconfiguration can serve as a gateway to large-scale exploitation. Common vulnerabilities include:


  • Unpatched software and outdated libraries
  • Poorly configured firewalls or network devices
  • Default credentials and weak passwords
  • Insecure APIs and web forms


These threats are not theoretical. In 2024 alone, over 3,000 critical CVEs (Common Vulnerabilities and Exposures) were disclosed globally, targeting everything from routers to cloud infrastructure.

Best Practices or Solutions

To counter these challenges, a structured approach to penetration testing is essential. Organisations should follow best practices such as:


  • Adopting frameworks like NIST or Cyber Essentials to standardise security assessments.
  • Running regular testing before and after changes to networks or applications.
  • Documenting and remediating all vulnerabilities found.
  • Training internal staff on how to interpret results and maintain secure configurations.


Using the right tools, in the right order, can streamline the testing process and maximise impact. Below we explore some of the most reliable tools used by professionals.

1. Nmap: The Network Mapper


a. Key Features

Nmap (Network Mapper) is one of the oldest and most respected tools in the cybersecurity arsenal. It is used to discover devices and services on a network.


Key features include:


  • Port scanning to identify open, closed, or filtered ports.
  • Service and version detection to uncover what is running on each port.
  • Operating system (OS) fingerprinting to guess the target’s OS based on responses.
  • Nmap Scripting Engine (NSE) which allows automated vulnerability detection and network inventory.


b. Best Use Cases

Nmap shines during the reconnaissance phase of penetration testing. Examples include:


  • Mapping a company’s internal infrastructure.
  • Scanning an exposed server for running services.
  • Detecting unauthorised devices connected to the network.


For instance, a tester targeting an exposed cloud server might use Nmap to determine which services are exposed (e.g. SSH, HTTP, RDP), their versions, and if known vulnerabilities exist for those versions.


c. Output Interpretation

Understanding Nmap output is vital. An example:

PORT STATE SERVICE
22/tcp Open ssh
80/tcp Open http
443/tcp Filtered https
  • Open means traffic is accepted and a service is responding.
  • Filtered suggests a firewall is blocking probing attempts.
  • Using flags like -sV can reveal version info (Apache 2.4.7, etc.).


Scripts via NSE can scan for vulnerabilities like Heartbleed or outdated software with script vuln.

2. Burp Suite: Web App Testing Swiss Army Knife

a. Key Features


Burp Suite is an all-in-one platform for web application testing developed by PortSwigger. It is used extensively for testing login forms, injection points, and session handling.


Key features include:


  • Intercepting proxy to modify traffic between browser and server.
  • Spider to map out web application structure.
  • Intruder to automate attacks like credential brute-forcing or fuzzing inputs.
  • Scanner (Pro version) for automated vulnerability discovery.


b. Best Use Cases

Burp Suite is ideal for:


  • Testing login and session mechanisms.
  • Finding injection flaws such as XSS or SQL injection.
  • Exploring complex APIs and tracking token-based authentication flows.


A security tester might use Burp to intercept a login request, modify parameters (like adding a script), and observe whether input is properly sanitised.


c. Output Interpretation

The Scanner tool highlights issues by severity (high, medium, low) and confidence levels.

Examples include:


  • Reflected XSS on a search field with medium confidence.
  • Insecure cookie flags such as missing HttpOnly.


Using tools like Repeater helps test individual requests repeatedly with slight variations, making it easier to identify specific vulnerable behaviours.

3. Beyond Nmap and Burp: Additional Must-Have Tools

a. Nikto

Nikto is a web server scanner that checks for outdated software, misconfigurations, and dangerous files like /admin/ or /phpinfo.php.


Example use case: Detecting if a web server is running an old version of Apache vulnerable to known exploits.


b. Metasploit

Metasploit is a powerful framework for developing and executing exploits. It includes hundreds of payloads and post-exploitation tools.


Example use case: Exploiting a known vulnerability in SMB and gaining remote shell access on a Windows host.


c. Dirbuster / Gobuster

These tools brute-force directories and files on web servers. They are useful for discovering hidden admin panels or sensitive directories.


Example use case: Finding /backup.zip on a public-facing website.



d. Wireshark

Wireshark captures and analyses packets in real time. It is essential for troubleshooting and identifying suspicious traffic.


Example use case: Capturing unencrypted credentials over HTTP or inspecting DNS tunnelling.

4. Putting It All Together: A Sample Workflow

An effective penetration test often follows a phased approach:


  • Reconnaissance: Start with Nmap to identify open ports and services.
  • Web Testing: Use Burp Suite and Nikto to find web vulnerabilities.
  • Enumeration: Run Dirbuster to uncover hidden paths and gather further data.
  • Exploitation: Use Metasploit to exploit known vulnerabilities found earlier.
  • Post-Exploitation: Secure shell access allows examination of internal data and lateral movement.
  • Traffic Monitoring: Wireshark helps to identify what is leaking during your testing or to verify attack success.


This workflow ensures thorough coverage of infrastructure, web apps, and network behaviour.

5. Output Interpretation Tips

Understanding the results of your tests is just as important as running the tools. Some tips include:


  • Filter false positives by verifying findings with multiple tools.
  • Prioritise vulnerabilities based on CVSS score, ease of exploit, and potential impact.
  • Document clearly use screenshots, summaries, and recommendations.


Cross-reference Nmap results with Metasploit modules. Use Burp to validate what Dirbuster finds. When all tools are used together, the picture becomes clearer.

The Cybergen Approach

At Cybergen, we believe in empowering organisations to protect their infrastructure with clarity, confidence, and cutting-edge tools.


We provide:

  • Penetration testing services tailored to your organisation’s environment.
  • Security assessments and Cyber Essentials certification guidance.
  • Training workshops for in-house IT and security teams.
  • Customised security dashboards to interpret and act on findings.


Cybergen equips clients with the skills and tools they need to face cyber threats head-on.

Summary

Cyber threats are growing faster than ever, and businesses must stay ahead. Penetration testing tools like Nmap, Burp Suite, Metasploit, and others are indispensable for identifying weaknesses before attackers do. Understanding how to use and interpret these tools forms the backbone of a strong cybersecurity defence.


Whether you are an IT professional, security analyst, or business leader, equipping yourself with the right knowledge and tools is the first step towards digital resilience. Visit Cybergen Security to learn how we can support your cybersecurity journey.


Stay secure, stay informed, and always test your defences before someone else does.

Ready to strengthen your security posture? Contact us today for more information on protecting your business.


Let's get protecting your business

Bibliography


  • Scarfone, K. and Mell, P. (2007). Guide to Intrusion Detection and Prevention Systems (IDPS). NIST.
  • PortSwigger. (2023). Burp Suite Documentation. Available at: https://portswigger.net/burp
  • Fyodor. (2023). Nmap Reference Guide. Available at: https://nmap.org
  • CVE Details. (2023). Latest Vulnerabilities by Year. Available at: https://www.cvedetails.com
  • OWASP Foundation. (2023). OWASP Top Ten. Available at: https://owasp.org
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